euL1db
The European database of L1-HS retrotransposon insertions in humans

Home Background Search Browse Utilities Help FAQ Data Contact
Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

157 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1817 chr1 75192898 75192898 - unknown germline . no 256 CRYZ
srip2286 chr1 90844091 90844091 . unknown germline . no 256 .
srip2420 chr1 95729454 95729454 - unknown germline . no 256 .
srip2479 chr1 95801850 95801850 - unknown germline . no 256 .
srip2800 chr1 101978983 101978983 - unknown germline . no 256 .
srip3188 chr1 105028221 105028221 + unknown germline . no 256 .
srip4127 chr1 149308428 149308428 + unknown germline . no 256 LOC645262
srip4172 chr1 152443890 152443890 - unknown germline . no 256 .
srip4746 chr1 165553142 165553142 - unknown germline . no 256 .
srip5421 chr1 179575368 179575368 - unknown germline . no 256 TDRD5
srip5555 chr1 183969678 183969678 - unknown germline . no 256 GLT25D2
srip6849 chr1 221827812 221827812 - unknown germline . no 256 .
srip6995 chr1 225272510 225272510 + unknown germline . no 256 DNAH14
srip7392 chr1 242311570 242311570 + unknown germline . no 256 PLD5
srip8460 chr10 25707693 25707693 - unknown germline . no 256 GPR158
srip9785 chr10 80529018 80529018 . unknown germline . no 256 .
srip10590 chr10 91717640 91717640 - unknown germline . no 256 .
srip11839 chr10 124455225 124455225 + unknown germline . no 256 .
srip12802 chr11 25123346 25123346 - unknown germline . no 256 .
srip13829 chr11 33670130 33670130 + unknown germline . no 256 C11orf41
srip14724 chr11 48360744 48360744 - unknown germline . no 256 .
srip15391 chr11 58171843 58171843 + unknown germline . no 256 .
srip16523 chr11 83652358 83652358 - unknown germline . no 256 DLG2
srip17196 chr11 94684368 94684368 + unknown germline . no 256 .
srip18135 chr11 111082407 111082407 . unknown germline . no 256 .
srip19273 chr11 134305645 134305645 - unknown germline . no 256 .
srip19896 chr12 11219195 11219195 - unknown germline . no 256 PRH1-PRR4
srip20135 chr12 12933687 12933687 - unknown germline . no 256 APOLD1
srip22225 chr12 43256979 43256979 - unknown germline . no 256 .
srip23982 chr12 79338030 79338030 - unknown germline . no 256 SYT1
srip24629 chr12 84965140 84965140 + unknown germline . no 256 .
srip25655 chr12 117814453 117814453 - unknown germline . no 256 .
srip26076 chr12 118186932 118186932 + unknown germline . no 256 KSR2
srip26375 chr12 126802936 126802936 - unknown germline . no 256 .
srip29066 chr13 61462338 61462338 - unknown germline . no 256 .
srip30330 chr13 72968678 72968678 + unknown germline . no 256 .
srip30974 chr13 79259790 79259790 - unknown germline . no 256 .
srip31563 chr13 85871605 85871605 - unknown germline . no 256 .
srip31988 chr13 86340151 86340151 - unknown germline . no 256 .
srip33550 chr13 104296230 104296230 - unknown germline . no 256 .
srip35230 chr14 28301256 28301256 + unknown germline . no 256 .
srip35467 chr14 31150816 31150816 - unknown germline . no 256 SCFD1
srip35856 chr14 36674752 36674752 + unknown germline . no 256 .
srip37873 chr14 67419872 67419872 - unknown germline . no 256 GPHN
srip39736 chr15 37707890 37707890 - unknown germline . no 256 .
srip42448 chr15 83551620 83551620 - unknown germline . no 256 HOMER2
srip43265 chr15 100931152 100931152 - unknown germline . no 256 .
srip45517 chr16 33992437 33992437 . unknown germline . no 256 .
srip46338 chr16 71028016 71028016 + unknown germline . no 256 HYDIN
srip46402 chr16 76865783 76865783 - unknown germline . no 256 .
srip46541 chr17 6341639 6341639 - unknown germline . no 256 .
srip47453 chr17 31640351 31640351 + unknown germline . no 256 ACCN1
srip47705 chr17 32813627 32813627 + unknown germline . no 256 .
srip48962 chr18 15095254 15095254 - unknown germline . no 256 .
srip50160 chr18 50097747 50097747 - unknown germline . no 256 DCC
srip50359 chr18 51425734 51425734 - unknown germline . no 256 .
srip51617 chr18 74515281 74515281 - unknown germline . no 256 LOC100131655
srip52781 chr2 7050600 7050600 + unknown germline . no 256 .
srip53481 chr2 23191008 23191008 - unknown germline . no 256 .
srip53923 chr2 35879345 35879345 + unknown germline . no 256 .
srip54111 chr2 36381245 36381245 + unknown germline . no 256 .
srip55708 chr2 78992035 78992035 - unknown germline . no 256 .
srip56872 chr2 106163161 106163161 + unknown germline . no 256 .
srip57740 chr2 129573979 129573979 + unknown germline . no 256 .
srip57897 chr2 137426136 137426136 - unknown germline . no 256 .
srip58238 chr2 141852915 141852915 - unknown germline . no 256 LRP1B
srip59209 chr2 147020925 147020925 + unknown germline . no 256 .
srip59263 chr2 150518957 150518957 + unknown germline . no 256 .
srip60792 chr2 191478707 191478707 - unknown germline . no 256 .
srip62636 chr2 235519802 235519802 + unknown germline . no 256 .
srip63056 chr20 7292193 7292193 + unknown germline . no 256 .
srip63471 chr20 16479499 16479499 - unknown germline . no 256 KIF16B
srip64020 chr20 25895497 25895497 - unknown germline . no 256 .
srip64058 chr20 25903871 25903871 - unknown germline . no 256 .
srip64087 chr20 26249102 26249102 + unknown germline . no 256 LOC100287605
srip64765 chr20 41952105 41952105 - unknown germline . no 256 .
srip65414 chr21 10761024 10761024 + unknown germline . no 256 .
srip66295 chr21 23626198 23626198 - unknown germline . no 256 .
srip66931 chr21 29069179 29069179 + unknown germline . no 256 .
srip68758 chr22 44324597 44324597 - unknown germline . no 256 PNPLA3
srip70111 chr3 19881024 19881024 + unknown germline . no 256 .
srip71086 chr3 26524455 26524455 - unknown germline . no 256 .
srip71904 chr3 38626071 38626071 + unknown germline . no 256 SCN5A
srip72712 chr3 55788574 55788574 + unknown germline . no 256 ERC2
srip73794 chr3 75101217 75101217 + unknown germline . no 256 .
srip73929 chr3 75728590 75728590 . unknown germline . no 256 .
srip75086 chr3 84433390 84433390 + unknown germline . no 256 .
srip75288 chr3 84593281 84593281 - unknown germline . no 256 .
srip75591 chr3 85576556 85576556 + unknown germline . no 256 CADM2
srip77245 chr3 123590719 123590719 + unknown germline . no 256 MYLK
srip79876 chr3 169269958 169269958 + unknown germline . no 256 MECOM
srip79970 chr3 173755702 173755702 - unknown germline . no 256 NLGN1
srip80027 chr3 173917220 173917220 - unknown germline . no 256 NLGN1
srip80360 chr3 176091325 176091325 + unknown germline . no 256 .
srip80851 chr3 181192836 181192836 + unknown germline . no 256 .
srip81480 chr3 186372132 186372132 + unknown germline . no 256 .
srip82105 chr3 193354172 193354172 - unknown germline . no 256 OPA1
srip82290 chr4 5667994 5667994 - unknown germline . no 256 EVC2
srip86167 chr4 66413931 66413931 + unknown germline . no 256 EPHA5
srip86342 chr4 66809074 66809074 - unknown germline . no 256 .
srip87038 chr4 71093306 71093306 + unknown germline . no 256 C4orf7
srip89969 chr4 112628966 112628966 + unknown germline . no 256 .
srip90340 chr4 115132699 115132699 + unknown germline . no 256 .
srip90896 chr4 124630700 124630700 . unknown germline . no 256 LOC285419
srip92193 chr4 134596423 134596423 + unknown germline . no 256 .
srip92815 chr4 138177329 138177329 + unknown germline . no 256 .
srip92862 chr4 138413561 138413561 - unknown germline . no 256 .
srip95430 chr4 190895541 190895541 . unknown germline . no 256 .
srip95438 chr4 190926001 190926001 . unknown germline . no 256 .
srip96894 chr5 21207723 21207723 + unknown germline . no 256 .
srip97764 chr5 33633341 33633341 . unknown germline . no 256 ADAMTS12
srip98058 chr5 33797550 33797550 - unknown germline . no 256 ADAMTS12
srip98156 chr5 34459996 34459996 + unknown germline . no 256 .
srip99520 chr5 68263468 68263468 - unknown germline . no 256 .
srip100731 chr5 89450775 89450775 + unknown germline . no 256 .
srip101089 chr5 96866415 96866415 + unknown germline . no 256 .
srip103355 chr5 125040043 125040043 + unknown germline . no 256 .
srip105255 chr5 155619871 155619871 + unknown germline . no 256 .
srip105734 chr5 160435672 160435672 - unknown germline . no 256 .
srip107529 chr6 13503042 13503042 + unknown germline . no 256 .
srip107738 chr6 19793122 19793122 + unknown germline . no 256 .
srip109134 chr6 57494221 57494221 - unknown germline . no 256 PRIM2
srip111039 chr6 77980645 77980645 - unknown germline . no 256 .
srip111407 chr6 85929801 85929801 . unknown germline . no 256 .
srip112056 chr6 91669514 91669514 - unknown germline . no 256 .
srip112704 chr6 102283763 102283763 - unknown germline . no 256 GRIK2
srip113147 chr6 118200271 118200271 + unknown germline . no 256 .
srip113227 chr6 123647635 123647635 + unknown germline . no 256 TRDN
srip113808 chr6 142450105 142450105 - unknown germline . no 256 .
srip114427 chr6 148163578 148163578 + unknown germline . no 256 .
srip114756 chr6 148195798 148195798 + unknown germline . no 256 .
srip115701 chr6 162181263 162181263 + unknown germline . no 256 PARK2
srip117463 chr7 52789459 52789459 + unknown germline . no 256 .
srip117897 chr7 57768877 57768877 - unknown germline . no 256 LOC100287663
srip117997 chr7 61980495 61980495 . unknown germline . no 256 .
srip118301 chr7 62492938 62492938 + unknown germline . no 256 .
srip118516 chr7 66591179 66591179 - unknown germline . no 256 TYW1
srip119674 chr7 84901723 84901723 - unknown germline . no 256 .
srip121760 chr7 107829256 107829256 + unknown germline . no 256 NRCAM
srip121997 chr7 108325669 108325669 + unknown germline . no 256 .
srip122278 chr7 110484750 110484750 + unknown germline . no 256 IMMP2L
srip125439 chr8 24926547 24926547 - unknown germline . no 256 .
srip128296 chr8 87315042 87315042 + unknown germline . no 256 .
srip129133 chr8 115788572 115788572 - unknown germline . no 256 .
srip129412 chr8 115881775 115881775 + unknown germline . no 256 .
srip131086 chr9 6290487 6290487 + unknown germline . no 256 .
srip131398 chr9 8344967 8344967 + unknown germline . no 256 PTPRD
srip131738 chr9 19671056 19671056 . unknown germline . no 256 SLC24A2
srip132867 chr9 32092741 32092741 - unknown germline . no 256 .
srip133409 chr9 32463891 32463891 - unknown germline . no 256 DDX58
srip133635 chr9 34904794 34904794 - unknown germline . no 256 .
srip135581 chr9 111564963 111564963 + unknown germline . no 256 .
srip135882 chr9 118083873 118083873 - unknown germline . no 256 DEC1
srip137240 chrX 54917144 54917144 + unknown germline . no 256 .
srip140091 chrX 102363183 102363183 + unknown germline . no 256 .
srip141062 chrX 122664864 122664864 - unknown germline . no 256 .
srip142280 chrY 13490336 13490336 + unknown germline . no 256 .